CDS

Accession Number TCMCG016C27837
gbkey CDS
Protein Id OMO51929.1
Location complement(join(2723..3116,3184..3686))
Organism Corchorus capsularis
locus_tag CCACVL1_29491

Protein

Length 298aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015654.1
Definition hypothetical protein CCACVL1_29491 [Corchorus capsularis]
Locus_tag CCACVL1_29491

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription elongation factor (TFIIS) family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K17498        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000414        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010793        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031060        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032239        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032386        [VIEW IN EMBL-EBI]
GO:0032784        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033157        [VIEW IN EMBL-EBI]
GO:0035065        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046822        [VIEW IN EMBL-EBI]
GO:0046825        [VIEW IN EMBL-EBI]
GO:0046831        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051223        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070201        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090087        [VIEW IN EMBL-EBI]
GO:0090239        [VIEW IN EMBL-EBI]
GO:1901983        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903827        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000197        [VIEW IN EMBL-EBI]
GO:2000756        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001253        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGGTGAAGCAGGAGGAGATTGAGGAGGATGATGAAATCAATGCCTCTGAGTCCCAGTCCCAAGAAAAGAACCAGAAGAGAAAGGCAGAAGAAATCAAAGTCTTCATCGGAGTGAGAAGACAAAAGAGGGTAAACCAGAAGCGAAGCCACGAAGAAATCTCTTTCTTCGTGGAGAAGGTGATGGCAGAGTTAGAGATTGCAGTTGAGGATGATGTCCAACTTAACAAAGACGGTAAACCTGCCATCAAAAAGCTCCAAAAGCTTCCTTTTATGAGAGATGTTCTATGCAAGAAACGTCTTCAATCATTCTTCCTAAATCATGGGATTTTGACACTGTTGAAGAATTGGCTTGAGCCTCTTCCAGATGGTAGTTTACCAAACTGCAATGTCCGAACTGAAATTTTGAATATTCTGACAGATTTTCCTCTCCACCTAAACCAACTATATCAAAGACAACAGTTGAAGAAGAGTGGACTTGGGAAAGCCGTTATGTTTCTAATCATATTTGACAAAAACGAAAGCTATAGTGATGTGAGAAACTCTGATTATATTCAAGTTCCCGTGGAGAGAAAGGCGCTGTCCAGACCTGAATTCAGAGGGTGTGATTTGGATTTTAATGTCAAGAATATTCAAAAGCATACCAAATCAAGCCAAGGAGCTATGAGGCCAGAACCAGCTGCATTGGTCTATAAGGTGCGCCCCAAATCGAATTGGAAGCCAGTTACACAACCAGTTTTGGATGAGTCCCGTGAAAGGATACTCAAGAGGCTGAGGGTGTCGAAAAAGTCGAACAAGAGAACAAGAGGCCATTGCAAGCTCAAAAGCCTAGTGCCCAGGGTCGTCAAATGTTCTTATTTTGATATTAAACAATGTAATATCAGTACTAAATAA
Protein:  
MAAVKQEEIEEDDEINASESQSQEKNQKRKAEEIKVFIGVRRQKRVNQKRSHEEISFFVEKVMAELEIAVEDDVQLNKDGKPAIKKLQKLPFMRDVLCKKRLQSFFLNHGILTLLKNWLEPLPDGSLPNCNVRTEILNILTDFPLHLNQLYQRQQLKKSGLGKAVMFLIIFDKNESYSDVRNSDYIQVPVERKALSRPEFRGCDLDFNVKNIQKHTKSSQGAMRPEPAALVYKVRPKSNWKPVTQPVLDESRERILKRLRVSKKSNKRTRGHCKLKSLVPRVVKCSYFDIKQCNISTK